Package: SaturnCoefficient 1.6

Davide Chicco
SaturnCoefficient: Statistical Evaluation of UMAP Dimensionality Reductions
A metric expressing the quality of a UMAP layout. This is a package that contains the Saturn_coefficient() function that reads an input matrix, its dimensionality reduction produced by UMAP, and evaluates the quality of this dimensionality reduction by producing a real value in the [0; 1] interval. We call this real value Saturn coefficient. A higher value means better dimensionality reduction; a lower value means worse dimensionality reduction. Reference: Davide Chicco et al. (February 2026), "The advantages of our proposed Saturn coefficient over continuity and trustworthiness for UMAP dimensionality reduction evaluation", PeerJ Computer Science 12:e3424 (pp. 1-30), <doi:10.7717/peerj-cs.3424>.
Authors:
SaturnCoefficient_1.6.tar.gz
SaturnCoefficient_1.6.zip(r-4.7-any)SaturnCoefficient_1.6.zip(r-4.6-any)SaturnCoefficient_1.6.zip(r-4.5-any)
SaturnCoefficient_1.6.tgz(r-4.6-any)SaturnCoefficient_1.6.tgz(r-4.5-any)
SaturnCoefficient_1.6.tar.gz(r-4.7-any)SaturnCoefficient_1.6.tar.gz(r-4.6-any)
SaturnCoefficient_1.6.tgz(r-4.6-emscripten)
manual.pdf |manual.html✨
DESCRIPTION
card.svg |card.png
SaturnCoefficient/json (API)
| # Install 'SaturnCoefficient' in R: |
| install.packages('SaturnCoefficient', repos = c('https://davidechicco.r-universe.dev', 'https://cloud.r-project.org')) |
Bug tracker:https://github.com/davidechicco/saturncoefficient_r_package/issues
Last updated from:42ab0bd976. Checks:9 OK. Indexed: yes.
| Target | Result | Time | Files | Syslog |
|---|---|---|---|---|
| linux-devel | OK | 177 | ||
| source / vignettes | OK | 206 | ||
| linux-release | OK | 174 | ||
| macos-release | OK | 210 | ||
| macos-oldrel | OK | 171 | ||
| windows-devel | OK | 117 | ||
| windows-release | OK | 85 | ||
| windows-oldrel | OK | 116 | ||
| wasm-release | OK | 125 |
Exports:calculatesSaturnContinuityTrustworthinesscontinuity_scoreSaturn_coefficienttrustworthiness_score
Dependencies:abindaskpassbase64encbslibcachemcliclustercommonmarkcpp11crayoncrosstalkcurldata.tabledeldirdigestdplyrevaluatefarverfastmapfontawesomefsGeneralizedUmatrixgenericsgeometryggplot2gluegtableherehighrhmshtmltoolshtmlwidgetshttpuvhttrisobandjquerylibjsonliteknitrlabelinglaterlatticelazyevallifecyclelinproglpSolvemagicmagrittrMASSMatrixMatrixCorrelationmemoisemgcvmimenlmeopensslotelpermutepillarpkgconfigplotlyplotrixpngpracmaprettyunitsprogressProjectionBasedClusteringpromisespurrrR6rappdirsRColorBrewerRcppRcppArmadilloRcppEigenRcppParallelRcppProgressRcppTOMLreticulaterlangrmarkdownrprojrootRSpectraS7sassscalesshinyshinyjsshinythemessourcetoolsstringistringrsystibbletidyrtidyselecttinytexumaputf8vctrsveganviridisLitewithrxfunxtableyaml
Readme and manuals
Help Manual
| Help page | Topics |
|---|---|
| Function that calculates the Saturn coefficient, trustworthiness score, and the continuity score of a UMAP dimensionality reduction | calculatesSaturnContinuityTrustworthiness |
| Function that calculates the continuity score of a UMAP dimensionality reduction | continuity_score |
| Function that calculates the Saturn coefficient to quantify the quality of a UMAP dimensionality reduction | Saturn_coefficient |
| Function that calculates the trustworthiness score of a UMAP dimensionality reduction | trustworthiness_score |
